Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397530.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1370.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9949

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
647--3831
171
18.6
171
80
4
2933
38
11
14
35
1.82
647--3831
516
6.2
513
81
4
3229
38
11
14
35
1.82
647--3831
856
3.7
856
85
4
3773
38
11
14
35
1.82
4841--6278
170
8.4
171
75
8
699
37
11
13
36
1.81
4794--6485
343
4.9
342
77
6
1527
37
11
14
35
1.82
4503--6485
171
11.6
171
75
4
1479
37
11
13
35
1.82
4794--6485
683
2.5
685
84
4
2074
37
11
14
35
1.82
6671--7949
171
7.5
168
78
7
914
39
11
12
35
1.79
6828--8007
171
6.9
169
79
6
1042
40
11
11
35
1.78
6923--9067
342
6.2
339
76
9
1631
39
12
12
35
1.81
7980--8030
22
2.3
23
89
6
86
49
11
11
27
1.74
8020--9067
171
6.1
170
75
7
745
38
13
13
34
1.84

Tables:   1

The End!