Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400046.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3266.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11096

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12--3433
172
20.0
171
78
5
2996
38
12
13
35
1.82
18--3433
514
6.7
512
78
6
3059
38
12
13
35
1.82
4112--4502
172
2.3
172
84
3
495
41
9
12
36
1.76
4630--4937
171
1.9
161
82
4
316
37
10
12
37
1.76
6231--6275
22
2.0
22
82
0
54
37
0
4
57
1.19
6773--6821
22
2.3
22
78
3
55
38
0
4
57
1.18
6766--11095
171
25.3
170
75
7
2918
35
13
11
39
1.81
6766--10784
513
7.8
511
77
7
3243
35
13
11
39
1.81

Tables:   1

The End!