Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400063.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3282.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7822

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
742--2531
171
10.5
171
79
3
1681
36
13
11
37
1.82
749--2531
512
3.5
511
84
2
1979
36
13
11
37
1.82
3508--4515
514
2.0
490
80
3
998
35
13
10
36
1.79
2987--5295
171
13.5
169
72
5
1137
35
13
10
35
1.79
4661--5300
341
1.9
332
82
8
802
37
13
9
36
1.77
5077--5485
213
1.9
214
82
4
504
36
11
11
37
1.79
5796--6560
171
4.5
171
78
4
765
36
11
12
38
1.79
5796--6560
342
2.2
340
83
3
926
36
11
12
38
1.79
5836--6687
342
2.5
340
78
3
848
34
12
12
38
1.80
7036--7619
171
3.4
168
76
3
553
36
13
10
37
1.80

Tables:   1

The End!