Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397535.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3461.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9522

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
717--1042
171
2.0
159
77
12
241
32
15
12
36
1.84
1--2249
340
6.6
341
74
8
1532
34
13
11
38
1.80
1--2249
170
13.2
170
74
7
1362
34
13
11
38
1.80
3150--6103
171
17.3
170
72
6
1344
37
11
12
33
1.79
3150--5717
341
7.5
339
73
7
1552
37
11
13
33
1.79
6817--7204
170
2.3
170
83
4
471
35
14
10
39
1.81

Tables:   1

The End!