Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397542.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2284.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8912

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
694--3497
171
16.4
169
78
5
2292
38
12
14
34
1.83
3688--4805
171
6.6
170
72
8
635
37
11
14
35
1.82
4946--5297
172
2.1
171
81
4
406
38
11
13
35
1.81
5899--8890
171
17.5
170
76
7
1976
38
12
13
35
1.83
5899--8904
341
8.8
340
76
7
2224
38
12
13
35
1.83
5900--8890
512
5.8
512
78
5
2524
38
12
13
35
1.83

Tables:   1

The End!