Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400145.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_336.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11346

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
947--1718
172
4.5
171
78
1
711
33
15
11
35
1.83
2217--2690
172
2.8
172
79
5
458
33
12
11
40
1.78
2294--2748
172
2.7
171
80
6
429
34
11
12
40
1.80
2877--3488
170
3.6
168
78
4
539
34
15
12
34
1.84
4235--4979
171
4.4
169
78
6
653
34
13
12
38
1.83
4336--4979
341
1.9
342
81
1
781
34
14
12
39
1.83
5704--7072
171
8.0
169
80
4
1399
35
14
12
37
1.84
5707--7072
344
4.0
341
82
5
1493
35
14
12
37
1.84
7173--9257
171
12.2
171
79
6
1918
35
14
11
38
1.82
7173--9257
855
2.4
847
82
4
2339
35
14
11
38
1.82
7173--9257
684
3.1
679
81
4
2307
35
14
11
38
1.82

Tables:   1

The End!