Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397543.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5004.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8883

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--3428
171
20.1
171
77
4
2767
34
12
12
39
1.81
1--8883
513
17.4
509
73
8
4455
34
12
12
38
1.82
3433--8883
171
31.9
171
75
7
3380
34
13
13
38
1.83
4404--4449
20
2.2
20
84
7
56
26
10
6
56
1.58
4573--8883
341
12.7
341
77
6
3376
34
13
13
38
1.84
8495--8883
169
2.3
171
81
5
432
37
12
10
39
1.77

Tables:   1

The End!