Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400162.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3378.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4875

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--841
171
4.9
171
76
6
533
35
11
12
37
1.80
110--841
171
4.3
169
76
6
564
36
11
12
37
1.80
2039--2885
170
5.0
168
72
10
536
35
14
11
37
1.82
3421--4394
171
5.7
170
74
6
533
35
12
12
37
1.81
4484--4868
171
2.2
172
78
7
424
35
12
11
40
1.79

Tables:   1

The End!