Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397544.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_460.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8799

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--920
170
2.0
161
76
10
303
34
12
10
38
1.79
268--1071
172
4.7
170
73
8
565
35
13
10
37
1.80
1268--1470
109
1.9
109
82
0
262
36
11
14
36
1.83
1779--8799
171
40.8
171
75
7
4272
35
13
12
37
1.82
3112--3437
161
2.0
160
80
2
366
35
14
10
39
1.81
1779--8791
341
20.4
339
75
8
4751
35
13
12
37
1.82
4192--4625
234
1.9
233
83
3
568
36
13
14
35
1.85

Tables:   1

The End!