Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397547.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3389.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8557

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--398
173
2.3
171
80
3
458
36
14
10
38
1.81
1083--2486
171
8.3
171
76
5
1173
36
13
11
37
1.81
2644--3012
172
2.2
171
84
4
476
36
12
11
40
1.79
4507--6410
170
11.1
170
73
7
580
35
12
11
37
1.79
4173--6577
171
14.1
171
74
5
1282
35
12
11
37
1.79
4173--6577
341
7.0
340
72
6
1374
35
12
11
37
1.79
4495--6348
511
3.6
510
80
3
1799
35
12
10
37
1.78
6837--8557
172
10.1
168
76
5
1041
36
13
10
37
1.79
6837--8557
171
10.1
170
77
6
1352
36
13
10
37
1.79
6837--8557
343
5.0
339
77
6
1416
36
13
10
37
1.79

Tables:   1

The End!