Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397549.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_574.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8472

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
582--2261
171
9.8
171
79
5
1479
38
12
13
34
1.83
576--2254
341
4.9
337
80
5
1553
38
12
13
34
1.83
2963--2995
16
2.1
16
94
0
57
66
6
0
27
1.15
3447--4592
171
6.7
168
75
6
792
37
12
14
35
1.84
3447--5098
342
4.8
339
76
8
1162
38
12
14
35
1.83
4565--4613
21
2.3
21
100
0
98
16
18
16
48
1.81
4586--5077
171
2.9
171
80
4
562
39
11
13
36
1.80
4586--5160
171
3.4
171
78
6
540
37
12
14
36
1.83
5173--8200
342
8.9
342
79
5
2682
38
13
13
34
1.84
5173--8200
171
17.8
171
77
7
2366
38
13
13
34
1.84

Tables:   1

The End!