Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397552.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4798.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7770

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--3392
171
19.8
171
73
6
1862
34
13
11
37
1.80
1373--3382
170
11.8
170
73
10
765
34
13
12
37
1.82
1413--3709
682
3.4
679
78
6
1858
34
13
12
37
1.83
3244--3526
151
1.9
152
82
10
357
36
15
12
36
1.85
3248--4056
339
2.4
331
78
9
748
35
13
12
36
1.83
4502--4934
168
2.5
167
80
7
426
37
13
11
37
1.81
4502--4973
172
2.8
169
80
6
429
36
13
11
37
1.82
4224--7377
170
18.5
170
73
7
1486
34
13
11
37
1.80

Tables:   1

The End!