Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400277.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3486.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6644

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--310
172
1.8
170
85
2
440
37
11
13
37
1.80
433--879
164
2.7
170
76
8
462
36
15
14
34
1.87
2365--3060
171
4.1
172
73
5
392
35
13
12
36
1.81
3906--6644
171
16.0
171
77
3
2170
34
14
12
36
1.84
3906--6644
512
5.3
511
80
3
2555
34
14
12
36
1.84

Tables:   1

The End!