Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400331.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3534.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5231

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
467--2628
170
12.7
167
72
6
781
34
13
11
36
1.81
467--1862
511
2.7
512
76
5
1122
34
12
11
38
1.80
467--4043
171
21.0
168
71
6
784
33
12
11
36
1.80
467--4043
682
5.2
678
71
6
1723
33
12
11
36
1.80

Tables:   1

The End!