Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397561.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5138.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7326

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--6369
171
37.3
171
72
8
1813
37
11
12
35
1.80
659--6391
682
8.4
678
75
7
2182
37
11
12
35
1.80
1--6361
513
12.4
508
73
6
2824
37
11
12
35
1.80
3991--4029
20
1.9
21
89
5
62
23
20
10
46
1.81
4417--4447
15
2.1
15
93
0
53
70
0
0
29
0.87
1--6391
342
18.7
340
73
7
3093
37
11
12
35
1.80
6502--6823
171
1.9
169
83
3
414
39
9
12
38
1.75
6574--6943
169
2.2
172
75
8
373
40
10
11
38
1.75

Tables:   1

The End!