Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397566.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4833.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7152

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--1095
171
6.4
171
79
4
1018
34
13
13
38
1.84
26--5341
342
15.8
341
76
7
4178
35
13
12
38
1.84
804--1093
155
1.9
155
82
4
370
36
14
13
35
1.86
845--1128
155
1.8
153
78
6
320
35
13
12
39
1.81
1224--5341
341
12.2
341
77
6
3477
34
13
12
38
1.83
1224--2217
171
5.8
170
78
4
951
34
14
12
38
1.85
4032--4307
151
1.8
152
83
5
371
35
13
9
41
1.77
4896--4941
20
2.2
20
84
7
56
32
10
6
50
1.63
2231--5002
171
16.4
169
76
7
1858
35
13
12
38
1.83
4985--5023
16
2.4
16
95
0
69
25
28
23
23
1.99
5014--5341
171
1.9
171
84
2
444
37
12
12
37
1.82
6002--6364
170
2.1
170
83
2
442
34
11
12
41
1.79

Tables:   1

The End!