Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400400.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3599.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11617

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1111--1186
35
2.2
35
95
0
134
34
28
11
25
1.91
2432--4941
171
14.6
170
78
6
2017
39
11
12
35
1.81
2514--9171
342
19.2
339
70
11
2155
39
11
13
35
1.81
4612--4648
16
2.3
16
95
0
65
54
2
0
43
1.14
4966--9171
171
24.6
171
72
10
2110
39
11
13
35
1.81
6715--6746
13
2.4
14
90
10
50
65
0
0
34
0.93
6701--6753
23
2.3
23
78
12
56
56
3
0
39
1.17
6527--6899
194
1.9
193
81
9
456
39
9
12
38
1.76
5043--9171
513
8.1
510
76
7
2885
39
11
13
35
1.81
9807--10650
170
5.0
169
75
9
648
39
12
12
35
1.81
9807--10650
341
2.5
339
79
7
865
39
12
12
35
1.81

Tables:   1

The End!