Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400412.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_361.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22863

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2679--3560
170
5.2
171
75
3
716
38
11
13
34
1.82
2674--3564
342
2.6
343
77
2
878
39
11
13
34
1.82
5636--6378
169
4.3
170
73
6
511
39
11
13
33
1.80
6518--7278
172
4.4
171
79
5
682
37
12
13
34
1.82
12020--12353
169
2.0
159
77
9
312
37
11
11
37
1.77
13731--14058
170
2.0
160
78
8
329
36
11
12
36
1.79
15074--15568
169
2.9
170
78
7
475
37
9
13
39
1.77
14998--15618
170
3.7
169
75
9
566
36
9
14
39
1.79
15746--16208
168
2.7
169
79
5
452
41
8
13
36
1.74
18469--20391
171
11.3
171
78
5
1656
36
13
11
38
1.81
18463--20391
341
5.6
341
78
6
1732
35
13
11
38
1.81

Tables:   1

The End!