Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397569.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_2179.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6851

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--554
171
3.2
168
78
6
501
38
12
13
34
1.81
1002--2348
170
7.8
168
71
8
772
36
12
13
33
1.82
1713--2338
172
3.7
171
82
2
711
38
13
13
34
1.84
1713--2338
342
1.8
343
85
3
884
38
13
13
34
1.84
2483--2753
149
1.8
149
84
3
375
40
11
13
34
1.80
2601--5286
171
15.7
171
79
5
2513
38
11
13
36
1.81
2601--5286
341
7.9
342
79
6
2357
38
11
13
36
1.81
5501--6851
170
7.9
169
78
6
1134
35
13
12
38
1.83
5501--6849
510
2.6
507
79
5
1307
35
13
12
38
1.83

Tables:   1

The End!