Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397573.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5146.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6629

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
227--2580
170
13.8
170
73
6
1417
35
13
9
36
1.77
2235--2563
174
2.0
160
81
6
304
37
13
8
37
1.76
4394--6629
170
13.1
170
70
4
960
34
12
9
35
1.77
5644--6387
171
4.4
160
74
13
473
35
12
9
38
1.76
6416--6454
20
1.9
20
89
5
60
48
10
12
28
1.74

Tables:   1

The End!