Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397576.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4346.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6480

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--5398
171
31.6
169
78
8
4163
37
11
13
35
1.82
171--5398
685
7.7
682
80
5
5127
37
11
13
35
1.82
1--5398
514
10.5
508
79
6
4782
37
11
13
35
1.82
5418--6375
171
5.6
171
76
3
773
35
11
12
36
1.80
5447--6375
341
2.7
341
77
2
792
35
11
12
35
1.80

Tables:   1

The End!