Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397578.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1148.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6287

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--377
172
2.2
171
82
7
442
36
14
10
37
1.81
740--1792
171
6.2
170
72
6
589
33
14
10
36
1.80
3053--3754
342
2.1
342
82
2
858
35
13
10
38
1.79
2325--3754
171
8.4
169
74
8
714
34
14
10
37
1.80
3609--3895
141
2.0
141
82
5
348
36
17
12
33
1.87
3778--6180
342
7.1
342
77
6
1674
35
13
10
37
1.80
3750--6180
171
14.3
170
73
9
1388
35
13
10
37
1.79

Tables:   1

The End!