Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397581.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1182.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6090

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
18--2442
171
14.2
169
77
7
1981
36
12
12
38
1.82
2319--2560
122
2.0
122
80
9
280
40
13
14
32
1.84
2438--2809
171
2.2
171
81
3
446
36
11
14
37
1.83
2748--2875
64
2.0
64
84
3
168
33
3
16
46
1.65
2577--3051
244
2.0
235
84
6
607
35
10
15
39
1.81
2925--3633
171
4.2
169
78
7
654
35
14
13
37
1.84
3545--3726
91
2.0
90
82
3
222
37
20
15
26
1.92
3665--6090
513
4.7
505
78
7
2205
35
13
12
38
1.83
3655--6090
683
3.6
673
78
7
2212
35
13
12
38
1.83
3635--6090
171
14.4
169
78
5
1880
35
13
12
38
1.83

Tables:   1

The End!