Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397582.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_686.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6071

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5--1804
171
10.6
169
76
6
1333
40
13
12
34
1.82
40--1804
511
3.4
509
80
5
1624
40
12
12
34
1.81
1986--4000
170
11.9
168
72
8
1019
38
11
13
34
1.81
2232--3999
341
5.2
341
73
8
772
38
12
12
34
1.81
2229--4000
511
3.5
505
76
6
1306
38
12
12
34
1.81
3350--4113
341
2.2
339
78
7
751
36
11
13
37
1.82
4371--4865
171
2.9
169
81
7
540
35
13
13
38
1.84
5136--6071
171
5.5
170
78
5
818
34
13
12
39
1.82
5171--6071
341
2.6
342
79
8
843
34
13
12
39
1.83

Tables:   1

The End!