Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400544.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3738.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13464

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--726
171
4.2
169
80
5
791
38
10
14
36
1.80
1--726
342
2.1
343
83
4
912
38
10
14
36
1.80
1988--2314
170
1.9
170
82
7
414
37
11
14
36
1.82
2481--3396
171
5.4
171
81
7
943
35
14
12
36
1.84
2419--3392
342
2.8
340
85
2
1231
36
14
12
37
1.84
3646--4388
171
4.3
168
81
7
764
35
13
10
40
1.80
3646--4388
342
2.2
342
83
3
888
35
13
10
40
1.80
4511--5198
341
2.0
343
86
3
949
35
14
11
39
1.82
4511--5198
171
4.0
171
83
5
841
35
14
11
39
1.82
5817--7635
171
10.6
171
81
5
1834
35
13
11
38
1.82
5817--7635
343
5.3
341
83
5
1969
35
13
11
38
1.82
5817--7635
687
2.6
682
83
5
2133
35
13
11
38
1.82
7993--8655
171
3.9
171
73
4
510
33
14
11
36
1.83
8929--9657
171
4.2
171
81
5
749
35
13
11
39
1.81
10829--11253
170
2.5
170
81
4
489
34
15
11
36
1.84
11699--12989
172
7.5
171
79
5
1327
35
13
12
38
1.82

Tables:   1

The End!