Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400546.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_374.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18185

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5569--5660
35
2.6
35
89
0
148
29
13
26
31
1.93
14587--14900
171
1.9
161
85
4
355
36
12
9
38
1.76
15482--16776
171
7.6
168
75
7
944
35
12
11
37
1.80
15482--16770
686
1.9
671
80
4
1421
35
12
11
38
1.80
15671--16650
515
1.9
502
79
6
1071
35
13
12
37
1.82
15482--16763
344
3.7
341
76
7
974
35
12
11
38
1.80
17376--18115
170
4.3
168
77
3
710
35
13
10
37
1.79
17376--18117
341
2.2
341
79
2
801
35
13
10
38
1.79

Tables:   1

The End!