Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400608.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_38.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16239

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
359--2165
171
10.6
170
81
4
1824
35
14
11
38
1.82
132--2165
342
6.0
341
81
4
1993
34
14
11
38
1.81
2470--2956
170
2.9
171
82
4
511
35
14
11
37
1.82
3184--3621
172
2.6
169
82
9
514
36
14
12
36
1.85
4205--5844
170
9.6
171
71
6
520
33
13
11
35
1.80
6450--7166
171
4.2
169
78
7
686
33
15
11
36
1.84
6499--7165
343
2.0
322
79
12
690
34
14
11
36
1.83
7697--8945
171
7.3
172
73
5
728
35
14
11
35
1.82
10250--10828
170
3.4
170
81
3
518
36
14
11
36
1.82
11415--11799
171
2.3
171
83
2
481
33
16
10
39
1.83
12033--12566
171
3.1
170
73
7
481
35
13
11
37
1.82
13144--13934
171
4.6
170
73
8
548
35
13
12
35
1.82
14035--14644
171
3.6
170
75
5
469
35
12
10
37
1.79

Tables:   1

The End!