Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400685.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3869.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6409

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--957
171
5.6
169
81
3
1020
34
13
12
39
1.83
1--957
342
2.8
340
84
3
1183
34
13
12
39
1.83
2135--2689
170
3.2
171
81
5
635
36
12
11
40
1.79
2784--3362
172
3.4
172
77
4
594
35
14
13
35
1.84
3807--5159
171
7.9
172
80
5
1379
36
13
12
37
1.82
3807--5159
515
2.6
511
83
4
1621
36
13
12
37
1.82
5347--6409
172
6.2
170
79
4
1046
35
14
12
37
1.84
5346--6409
343
3.1
336
80
4
1182
35
14
12
37
1.85
5347--6407
515
2.1
513
81
3
1204
35
14
12
37
1.84

Tables:   1

The End!