Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400717.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3898.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8203

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2390
171
14.0
169
79
7
2086
39
11
13
35
1.81
1--2390
341
7.0
338
79
4
2290
39
11
13
35
1.81
2623--4934
171
13.5
171
80
5
2132
38
11
14
35
1.82
2623--4934
682
3.4
678
81
5
2396
38
11
14
35
1.82
4779--4819
21
2.0
21
85
9
57
21
19
14
43
1.87
5419--6688
171
7.4
169
79
6
1097
38
12
14
35
1.83
5481--6659
341
3.5
339
77
7
1133
38
12
14
35
1.84
5481--6659
512
2.3
506
80
6
1238
38
12
14
35
1.84
6990--7535
171
3.2
169
76
8
441
33
13
10
40
1.79

Tables:   1

The End!