Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400724.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3903.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9357

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
651--2026
170
8.1
170
83
3
1583
37
11
13
36
1.82
651--2026
171
8.1
169
82
4
1493
37
11
13
36
1.82
651--2018
513
2.7
510
83
4
1744
37
12
13
36
1.82
651--2026
341
4.0
340
83
3
1667
37
11
13
36
1.82
2032--3174
170
6.7
170
78
5
1084
34
14
12
37
1.85
2044--3170
514
2.2
513
81
4
1256
34
15
12
37
1.85
3928--6389
171
14.4
171
76
4
1817
35
13
11
37
1.82
3928--6336
343
7.0
342
74
8
1311
35
13
11
38
1.81
3928--6326
511
4.7
511
76
6
1890
35
13
11
38
1.81
5497--6350
341
2.5
340
80
3
822
35
14
11
38
1.83
8744--8782
19
2.1
19
90
0
60
64
0
0
35
0.94

Tables:   1

The End!