Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400758.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_3937.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7036

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
543--2717
171
12.7
169
73
5
1129
35
12
13
34
1.81
543--2710
341
6.3
339
72
7
1073
35
12
13
34
1.81
543--2523
512
3.9
506
74
7
1460
35
12
13
34
1.82
1696--2719
512
2.0
499
76
9
1010
36
11
12
35
1.80
2853--3790
171
5.5
168
73
9
543
38
11
13
34
1.80
4621--4965
170
2.0
171
85
8
463
39
9
13
37
1.78
5307--5621
171
1.9
158
85
6
348
34
10
13
38
1.79

Tables:   1

The End!