Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397609.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5414.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4738

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1438--1493
25
2.2
25
77
0
67
28
19
25
26
1.99
1962--4375
171
14.2
171
78
5
2165
38
13
13
34
1.83
1962--4738
342
8.2
341
78
7
2392
38
12
13
34
1.83
1962--4738
512
5.5
510
78
7
2352
38
12
13
34
1.83
4240--4524
149
1.9
150
83
5
371
34
13
15
36
1.86
4373--4727
172
2.1
171
82
1
415
39
12
13
34
1.82

Tables:   1

The End!