Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400816.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_399.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30656

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
699--1134
173
2.5
171
83
3
527
42
10
12
32
1.77
699--1240
171
3.2
171
80
5
468
40
10
12
33
1.76
9614--9987
170
2.2
170
78
0
426
35
12
10
38
1.79
20228--21044
171
4.8
170
80
3
678
34
11
10
38
1.77
20208--21044
341
2.5
338
79
4
856
34
11
10
38
1.77
23696--24177
172
2.8
171
78
3
517
34
13
9
39
1.78
23696--24373
171
4.0
172
74
3
508
34
13
10
37
1.79

Tables:   1

The End!