Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400880.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4047.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4503

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
706--2526
172
10.6
170
78
5
1589
35
14
13
36
1.86
706--2520
343
5.3
342
80
4
1822
35
14
13
36
1.86
706--2526
515
3.5
513
79
6
2025
35
14
13
36
1.86
2803--3463
171
3.9
171
81
4
719
37
12
13
36
1.84
2803--3460
343
1.9
342
86
2
935
36
12
13
36
1.84
3749--4503
172
4.4
171
76
8
667
36
15
12
36
1.85

Tables:   1

The End!