Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397617.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1573.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4426

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
109--648
171
3.2
169
84
3
652
35
14
11
38
1.82
1018--1507
171
2.9
170
77
4
477
34
12
11
40
1.78
1775--2084
172
1.9
161
82
3
318
34
12
9
40
1.77
1187--3006
171
10.7
168
73
8
966
34
13
11
37
1.81
1726--2984
512
2.5
509
78
6
1172
35
13
11
37
1.80
3080--4426
171
7.9
169
75
9
742
36
13
11
38
1.81
3098--4418
342
3.9
337
75
9
1079
36
13
11
38
1.81

Tables:   1

The End!