Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400907.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4070.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4406

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
460--632
85
2.0
85
93
2
294
34
7
24
32
1.84
548--1425
170
5.2
170
74
6
517
36
12
14
33
1.85
1803--4406
171
15.0
172
74
10
1059
37
12
14
36
1.84
2404--4406
170
11.7
169
79
5
1833
37
12
14
35
1.84
1849--2904
556
1.9
556
80
4
1245
36
12
14
36
1.84
2434--4406
342
5.8
336
79
5
1877
37
12
14
35
1.84
2427--4406
683
2.9
678
81
5
2205
37
12
14
35
1.84

Tables:   1

The End!