Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400908.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4071.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3023

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
660--969
165
1.9
152
87
6
324
35
10
13
34
1.80
824--1965
170
6.7
170
74
6
657
36
10
13
36
1.79
980--1965
340
2.9
341
73
6
771
36
10
13
36
1.79
2098--3019
171
5.5
169
76
5
722
37
10
13
35
1.79
2098--2889
335
2.3
329
80
8
821
37
10
13
35
1.80

Tables:   1

The End!