Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400997.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4159.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6606

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--1003
172
2.4
170
81
3
481
40
13
11
33
1.81
1086--1469
170
2.2
168
84
4
493
41
11
11
34
1.79
2021--6606
341
13.6
337
78
8
3495
34
13
12
39
1.82
2021--6606
170
27.1
170
78
6
3477
34
13
12
39
1.82
2906--2945
21
1.9
21
84
0
53
47
17
15
20
1.83
3939--4250
151
2.1
150
83
4
387
34
14
12
39
1.83

Tables:   1

The End!