Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401030.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4191.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4973

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--412
170
2.4
170
86
4
562
34
12
14
39
1.83
1012--1528
171
3.0
169
79
5
583
35
14
11
38
1.82
1679--2580
171
5.3
171
82
2
945
40
11
14
34
1.81
1679--2580
343
2.6
341
83
1
1038
40
11
14
34
1.81
3429--3823
170
2.3
170
82
5
433
40
12
13
34
1.82
3577--3970
172
2.3
170
78
3
423
39
12
14
33
1.84
4037--4973
171
5.5
170
76
4
787
39
12
13
35
1.82
3776--4345
310
1.8
311
79
5
668
42
12
14
31
1.82
3578--4519
482
2.0
482
79
4
1049
39
11
14
33
1.83
3419--4686
652
1.9
652
79
4
1396
39
12
14
33
1.83

Tables:   1

The End!