Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401040.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_420.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28335

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3214--3263
21
2.4
21
96
0
91
54
8
22
16
1.68
8769--12283
170
20.6
170
75
6
2747
35
14
15
34
1.88
8765--12146
341
9.9
341
78
5
3097
35
14
15
34
1.88
14125--16135
170
11.8
170
73
7
1346
35
13
14
35
1.86
14125--16135
510
3.9
510
87
2
2563
35
13
14
35
1.86
17729--18159
170
2.5
169
79
3
506
33
15
15
33
1.89
17729--18266
170
3.2
167
76
6
503
36
14
14
32
1.87
18699--19431
171
4.3
170
77
5
676
37
13
14
34
1.85
18699--20089
512
2.7
510
79
2
1446
34
13
14
33
1.86
18699--19908
171
7.1
170
69
5
670
34
13
14
33
1.85
28030--28335
170
1.9
160
82
7
316
35
14
12
34
1.84

Tables:   1

The End!