Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401084.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4242.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4254

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1549
171
9.1
171
78
4
1302
34
14
12
38
1.84
1--1528
515
3.0
506
79
6
1535
34
14
12
38
1.84
1--1446
686
2.1
685
80
6
1594
34
14
12
39
1.83
1156--1955
428
1.9
426
82
3
1025
32
16
14
36
1.89
986--2147
599
1.9
597
82
4
1439
33
15
14
36
1.88
1565--2209
171
3.8
171
80
6
743
32
15
14
38
1.87
3112--3317
73
2.8
73
90
0
322
26
21
16
35
1.94

Tables:   1

The End!