Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401087.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4245.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6964

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
226--500
148
1.9
149
83
5
360
36
11
13
38
1.82
368--3628
172
19.0
171
76
7
2501
35
13
12
38
1.82
358--3625
170
19.0
169
74
9
1366
35
13
12
38
1.82
1143--1197
21
2.7
21
97
2
103
43
10
16
29
1.82
1159--3628
342
7.2
339
78
6
2098
35
13
12
38
1.82
5366--6063
170
4.1
169
78
8
646
37
13
15
33
1.86
5367--5988
341
1.8
343
81
5
776
36
13
15
33
1.87

Tables:   1

The End!