Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401139.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4295.1, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5747

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2235
171
13.1
169
73
8
1383
38
12
13
33
1.83
1--2235
343
6.5
341
74
7
1110
38
12
13
33
1.83
443--1724
514
2.5
516
91
1
2033
40
12
12
33
1.82
1411--1453
21
2.0
21
86
0
59
23
11
16
48
1.78
2406--2738
170
2.0
170
81
6
397
37
14
12
35
1.84
3091--3405
171
1.9
163
82
9
322
37
13
12
33
1.82
3806--4901
345
3.2
343
78
8
1044
40
13
12
34
1.81
3798--5742
171
11.3
170
73
7
1301
40
13
11
34
1.81
3979--5743
858
2.1
859
91
0
2861
40
12
12
34
1.81
4838--5747
345
2.7
341
77
7
973
40
13
11
33
1.81

Tables:   1

The End!