Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401140.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4295.2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4151

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2358
171
13.9
171
76
7
1709
38
12
14
34
1.84
1--2358
344
6.9
336
75
8
1772
38
12
14
34
1.84
2122--2599
241
2.0
241
92
1
798
39
12
12
35
1.81
2363--4144
171
10.4
170
77
4
1488
37
12
14
35
1.84
2363--4144
341
5.2
342
77
5
1557
37
12
14
35
1.84

Tables:   1

The End!