Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401175.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4326.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17261

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
589--625
19
1.9
19
88
0
56
51
13
13
21
1.75
1--1866
171
11.0
172
76
7
1510
35
14
11
38
1.82
2439--2773
172
2.0
171
81
6
392
35
14
11
38
1.82
2642--2894
136
1.9
137
82
2
321
35
17
11
35
1.85
2772--4310
171
9.0
169
77
8
1164
35
14
11
38
1.83
2463--3078
308
2.0
307
80
4
677
34
14
12
38
1.83
2772--5402
170
15.5
170
73
11
1435
35
14
11
37
1.83
2771--5402
342
7.8
340
76
7
2103
35
14
11
37
1.83
6181--7376
172
7.0
170
78
6
1105
39
11
13
34
1.81
6181--7376
341
3.5
339
81
4
1158
39
11
13
34
1.81
8515--8961
172
2.6
170
78
4
425
38
12
14
32
1.83
9114--9498
169
2.3
170
84
4
476
36
14
14
35
1.86
9560--10099
170
3.2
168
79
5
548
38
12
14
34
1.84
10330--12061
171
10.2
172
78
7
1522
38
11
14
35
1.83
10340--12009
672
2.5
673
81
6
1860
38
11
14
35
1.83
14210--15398
170
7.0
169
72
9
594
34
14
12
35
1.83

Tables:   1

The End!