Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397657.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_213.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2032

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36--149
42
2.7
42
82
4
124
14
40
28
17
1.88
103--286
75
2.4
80
84
9
233
13
36
29
20
1.90
638--740
46
2.2
46
81
5
118
10
39
30
19
1.85
688--1059
78
4.8
78
77
12
379
10
38
30
19
1.86
685--1402
118
6.1
118
67
14
420
9
39
31
19
1.84
680--1010
159
2.1
155
82
8
400
10
38
30
20
1.86
998--1089
40
2.3
40
88
5
141
9
40
31
18
1.83
761--1336
277
2.1
272
83
8
698
10
39
31
19
1.85
1000--1102
40
2.5
42
79
12
122
10
39
32
17
1.84
1039--1560
78
6.8
81
80
9
478
10
40
30
18
1.84
847--1245
199
2.0
193
84
4
505
10
39
31
18
1.84
1320--1437
34
3.4
34
70
12
112
7
42
31
18
1.78
1358--1464
34
3.0
37
66
13
96
10
40
31
17
1.83
1462--1560
40
2.6
38
73
7
92
12
40
27
20
1.87

Tables:   1

The End!