Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401298.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_444.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13200

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
381--884
171
2.9
171
75
5
514
37
11
14
35
1.81
2648--4082
171
8.4
171
75
8
1078
38
11
14
35
1.83
2643--4089
343
4.2
342
85
2
1863
38
11
14
35
1.83
4195--5262
171
6.2
167
78
8
877
37
12
14
35
1.84
4196--5262
514
2.1
515
85
3
1438
37
12
14
35
1.84
4196--5267
343
3.1
343
81
6
928
37
12
14
35
1.84
5371--6072
171
4.1
171
76
7
568
34
14
11
37
1.83
5368--6068
344
2.0
342
81
3
818
34
14
11
37
1.83
7502--8978
171
8.6
171
76
9
1249
36
14
12
37
1.83
7641--8996
342
4.0
339
84
5
1676
35
14
11
37
1.83
7426--8996
514
3.1
512
77
7
1310
36
14
12
37
1.84
9099--10162
342
3.1
337
82
5
1169
34
14
11
38
1.83
9100--10162
171
6.2
172
78
5
1060
34
14
11
38
1.83

Tables:   1

The End!