Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401638.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4756.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8080

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1219--2866
171
9.6
170
80
5
1531
35
14
13
37
1.85
1219--2873
342
4.8
340
81
4
1695
34
14
13
37
1.85
1252--2873
512
3.2
507
83
4
1921
35
14
13
37
1.85
3302--5384
172
12.1
170
80
4
2110
36
12
15
35
1.85
3995--4034
21
1.9
21
85
10
55
22
15
20
42
1.88
3302--5415
513
4.1
513
81
5
2191
36
12
15
35
1.85
6274--8076
171
10.5
170
79
4
1750
36
12
14
34
1.84
6274--8076
343
5.3
341
80
3
1712
36
12
14
34
1.84

Tables:   1

The End!