Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401685.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_480.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25970

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--22780
171
133.0
171
73
7
8546
38
12
12
34
1.82
13225--22756
341
28.0
341
78
6
7041
39
12
12
35
1.82
50--22756
342
66.3
341
74
6
11800
38
12
12
34
1.81
23243--25739
170
14.7
170
73
6
1382
38
12
12
34
1.80
23248--25545
341
6.8
337
74
7
1201
38
12
12
34
1.80
23611--24700
342
3.2
331
76
9
767
39
11
12
35
1.79

Tables:   1

The End!