Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401803.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4911.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5627

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14--3890
171
22.8
170
69
9
1212
38
12
12
33
1.81
1121--1617
170
3.0
161
74
12
353
39
12
12
34
1.80
580--3890
171
19.4
169
70
9
1350
38
12
12
34
1.81
4040--5627
171
9.4
170
75
8
939
39
13
12
34
1.82
4513--5627
334
3.3
337
77
7
893
40
12
11
35
1.79

Tables:   1

The End!